Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916129.1_cds_XP_016465822.1_58739
CDS Infomation

[gene=LOC107788640] [db_xref=GeneID:107788640] [protein=serine/threonine-protein kinase Nek5-like isoform X2] [protein_id=XP_016465822.1] [location=complement(join(19207..20667,20946..21557,21641..21692,21932..22005,22116..22165,22388..22448))] [gbkey=CDS]
Sequence

ATGTGCCCTGAACTTCTTGCGGATATTCCTTATGGTTTTAAATCAGATATTTGGTCCCTA
GGCTGTTGTATGTATGAAATGGCTGCTTATCGCCCTGCATTTAAAGCATTTGACATGGCT
GGATTAATAAGTAAGATTAATCGGTCGTCCATTGGGCCTCTGCCGTCTTGTTATTCTCCA
CCCTTGAAAACACTTATTAAAGGAATGCTGAGAAAGAATCCCGAGCATCGTCCCAGTGCT
TCTGAGCTCCTAAAGCACCCGTATTTGCTGCCATATGTTGAGCTATACCGACCGTCCTTT
ACTACTCGTGTGGCAAATCATATTGAAAAACCTGTCGCTACTGGTCGTGACTCTAGAAAG
AACATGGCGGAAAGCCAAAGTAGTACAAGTTCTTGTAGCAGGGCTTCCAATTATGATAAT
AAGGGCACTGATATAGATGTTGCTTTCGTTGACGACGATATTGACTTTGAGCAACCTCAT
TTCTTTGACGAAAATCACAGAGCTGATACTTTTCCTGAAGATACAGATGACTATGAGTCT
AAGAACATTATTGACGAAGAGAGGAGATGTCATGCAGAAGCTAAGCAACCTAAAACAATA
AAAAGTATCGTGCTGGCTGTGAAAGAAGGAAAAACGAGAGAGCATAGTTCTCCCATGAGG
GGCAACCGAGTGAAGGTTGGTGGTTCAGGCGCACAGAAAGCTAACACCGAACCATTACCA
AAGATCCCAAAACCAAGTTCAGTTACTCCTACTTCTAAACCTAATGCAGAGATGCCATCT
CCTGTATCAGCAAAGGCTGGATGTGATTCAGCAAAAAGGAATCACGGACCGCATACTTTA
AAGCATCAGTTGCCTGCAATTGAGTCTAGTACCAAGACTAAACCTAGACATGAGGGCATC
TCTACCTCTGGTCCTTCAAAACACGTTGCTGAAGATGGATTTCCTGCAAAGCCGAGACTG
CGTACCCCTCCTAACCTGATTAGACGACCCTCGTTTCCGAGAAGGATGAAACAAGTGGGG
CATGATGCCCCAAATACTCTTAACAATAATGTTAAGTCTGGTTCCGGCGACAATTCCCCC
TGTCCTGAAACGATTCCTGATTCTACGCCCGATGGCTGCCATACACATGCTATAAAGAAT
TGTGTGCAGCATTCTCGGAAGGTTTCATTAGGAGCTTCAAAAGAAATGCAAGCGGAGAGT
AGCATTTCTGCTTCTTCTTCTTCTGTATCAATTCAAGGATTTGAACTTTGTGACGATGCA
ACAACTCCTCCTTTTATAAATTTGACCGAACAGATGCTCCTAAGTCACGAAAGAGCTACT
GAAACTGAGACCACAAGATCAAGGCCTTCCTGGTCAACCACTAACTCATCTCTCTCGGAG
ATTGCTTTTGGTTCAGGGGAAACCCGTGATAACAAGAATTCTGAACCATGCTCCGTAGAA
AAGGTTGAGGAGCCTCATCACATTTTGGATGTTGGTGCTTGCAATCAGAAATCATACCCC
ACTTCGGCCTCCCCTGGGGACGATAAGTTTATGGTGAAGTTGTCATCCTCGACAACAGAA
ATTGCCTCTCCCACTGCTCCTCTTGTTCCCTTGAGTCAAATTAGTCTTCCTCACTCAGAC
AGCGCCTCAAAATCTGATGGTGACGACAAGTTTATTACAAAGGAACTCTTATGCTCTCCG
ACCGAAAGTATTACTCCCTCGCTCCCTCCTTTTTCACCTCCTCAAAACAATTTGTCGTCA
GAGAAGGGACTGACGACGGTTGTTCCAAAGAATATGGTTCTTGAAAAACCAGCTGCTTCT
GACGACATCATACATGTCATTCGACACAGTAGTTTCCGAGTTGGTTGTGAACAGCCAGCG
ACAGACACTATGGAGACAAATGCTGATGTTGGAAAACTGATAAATGTGGTAAGAGATGAA
GTTGATATCGACAATCTAGGTTCTCATGGCGCTCCAAATGCTTCTACTTTTGCTGGATCG
GTGATTGGTGTCCATACTAAGGAGATGGATGTAAGAAACAACAGCAGTCCAACCTCTTCA
GCACAAAGAATAGATTCTTCAGAGCCGGCTGCAGAGGAGGAAAGGCCGGTAAAGGAAACG
TTAGATGTCAAGTCTTTTAGACAAAGGGCAGATGCACTTGAAGGACTATTAGAACTATCT
GCTGACTTACTGGAACAAGACAGATTAGAAGAGCTCGCTGTCGTTCTAAAACCTTTCGGC
AAGAACAAGGTTTCACCGAGGGAGACGGCTATTTGGTTGGCCAAGAGTCTGAAAGGAATG
ATGCTTGACGAATCTGTGCGAAATTCATGA

Peptide Sequence

PEP ID

XP_016465822.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase Nek5-like isoform X2 [Nicotiana tabacum]
Sequence

MCPELLADIPYGFKSDIWSLGCCMYEMAAYRPAFKAFDMAGLISKINRSSIGPLPSCYSP
PLKTLIKGMLRKNPEHRPSASELLKHPYLLPYVELYRPSFTTRVANHIEKPVATGRDSRK
NMAESQSSTSSCSRASNYDNKGTDIDVAFVDDDIDFEQPHFFDENHRADTFPEDTDDYES
KNIIDEERRCHAEAKQPKTIKSIVLAVKEGKTREHSSPMRGNRVKVGGSGAQKANTEPLP
KIPKPSSVTPTSKPNAEMPSPVSAKAGCDSAKRNHGPHTLKHQLPAIESSTKTKPRHEGI
STSGPSKHVAEDGFPAKPRLRTPPNLIRRPSFPRRMKQVGHDAPNTLNNNVKSGSGDNSP
CPETIPDSTPDGCHTHAIKNCVQHSRKVSLGASKEMQAESSISASSSSVSIQGFELCDDA
TTPPFINLTEQMLLSHERATETETTRSRPSWSTTNSSLSEIAFGSGETRDNKNSEPCSVE
KVEEPHHILDVGACNQKSYPTSASPGDDKFMVKLSSSTTEIASPTAPLVPLSQISLPHSD
SASKSDGDDKFITKELLCSPTESITPSLPPFSPPQNNLSSEKGLTTVVPKNMVLEKPAAS
DDIIHVIRHSSFRVGCEQPATDTMETNADVGKLINVVRDEVDIDNLGSHGAPNASTFAGS
VIGVHTKEMDVRNNSSPTSSAQRIDSSEPAAEEERPVKETLDVKSFRQRADALEGLLELS
ADLLEQDRLEELAVVLKPFGKNKVSPRETAIWLAKSLKGMMLDESVRNS

Transcript Sequence

Gene sequence data has not been registered.